Avoiding best-effort cluster bootstrapping due to discovery of pre-7.0 nodes – How to solve related issues

Overview

Elasticsearch has many settings that can cause significant performance problems if not set correctly. To prevent this happening, Elasticsearch carries out “bootstrap checks” to ensure that these important settings have been covered. If any of the checks fail, Elasticsearch will write an error to the logs and will not start. In this guide we cover common bootstrap checks you should know and how to configure your settings correctly to pass the checks successfully.

Bootstrap checks are carried out when the network.host setting in:

network.host: 0.0.0.0

If network host is not set and you use the default localhost, then Elasticsearch will consider the node to be in development mode, and bootstrap checks will not be enforced.

Common issues with bootstrap checks

If you install elasticsearch using RPM or Debian packages (strongly recommended) then most of the important configuration is already done for you, and the only bootstrap checks you are likely to run up against are the following.

Heap size check

The minimum and maximum heap sizes specified in jvm.options (or via environment variables) must be equal to one another.

File descriptors check

Minimum file descriptors must have been set to at least 65535

Memory lock check

There are various methods used to prevent memory swapping, and you must use one of them.  The most common is to set in elasticsearch.yml

bootstrap.memory_lock: true

For this to be effective you must give permission to elasticsearch to enable this. There are various ways to do so, depending upon your operating system.

Discovery configuration checks

At least one of the following properties must be configured in elasticsearch.yml to ensure that your node can form a cluster properly:

• discovery.seed_hosts
• discovery.seed_providers
• cluster.initial_master_nodes

Less common bootstrap check issues

If you are not using RPM or debian packages, you may come across the following issues:

Max number of threads check

You must allow your system to create at least 4096 threads. In linux this is done by editing /etc/security/limits.conf and adjusting the nproc setting.

Max file size check

Your system should be able to create unlimited file sizes. In linux this is done by editing /etc/security/limits.conf and adjusting the fsize setting

Max virtual memory check

The system should be able to create unlimited virtual memory for the elasticsearch user.

This is done by editing /etc/security/limits.conf 

<user> - as unlimited

Max map count check

The system must be able to use mmap effectively.  This is done by running the command 

sysctl vm.max_map_count 262144

Other checks

The following checks are also carried out, but are rarely found:

OsX File Descriptor Check
Client Jvm Check
UseS erial GC Check
System Call Filter Check
Might Fork Check
On Error Check
On Out Of Memory Error Check
Early Access Check
G1GC Check
All Permission Check

Overview

An Elasticsearch cluster consists of a number of servers (nodes) working together as one. Clustering is a technology which enables Elasticsearch to scale up to hundreds of nodes that together are able to store many terabytes of data and respond coherently to large numbers of requests at the same time.

Search or indexing requests will usually be load-balanced across the Elasticsearch data nodes, and the node that receives the request will relay requests to other nodes as necessary and coordinate the response back to the user.

Notes and good things to know

The key elements to clustering are:

Cluster State – Refers to information about which indices are in the cluster, their data mappings and other information that must be shared between all the nodes to ensure that all operations across the cluster are coherent.

Master Node – Each cluster must elect a single master node responsible for coordinating the cluster and ensuring that each node contains an up-to-date copy of the cluster state.

Cluster Formation – Elasticsearch requires a set of configurations to determine how the cluster is formed, which nodes can join the cluster, and how the nodes collectively elect a master node responsible for controlling the cluster state. These configurations are usually held in the elasticsearch.yml config file, environment variables on the node, or within the cluster state.

Node Roles – In small clusters it is common for all nodes to fill all roles; all nodes can store data, become master nodes or process ingestion pipelines. However as the cluster grows, it is common to allocate specific roles to specific nodes in order to simplify configuration and to make operation more efficient. In particular, it is common to define a limited number of dedicated master nodes.

Replication – Data may be replicated across a number of data nodes. This means that if one node goes down, data is not lost. It also means that a search request can be dealt with by more than one node.

Common problems

Many Elasticsearch problems are caused by operations which place an excessive burden on the cluster because they require an excessive amount of information to be held and transmitted between the nodes as part of the cluster state. For example:

• Shards too small
• Too many fields (field explosion)

Problems may also be caused by inadequate configurations causing situations where the Elasticsearch cluster is unable to safely elect a Master node. This situation is discussed further in: 

• Master node not discovered
• Split brain problem

Backups

Because Elasticsearch is a clustered technology, it is not sufficient to have backups of each node’s data directory. This is because the backups will have been made at different times and so there may not be complete coherency between them. As such, the only way to backup an Elasticsearch cluster is through the use of snapshots, which contain the full picture of an index at any one time.

Cluster resilience

When designing an Elasticsearch cluster, it is important to think about cluster resilience. In particular – what happens when a single node goes down? And for larger clusters where several nodes may share common services such as a network or power supply – what happens if that network or power supply goes down? This is where it is useful to ensure that the master eligible nodes are spread across availability zones, and to use shard allocation awareness to ensure that shards are spread across different racks or availability zones in your data center.

Overview

The process known as discovery occurs when an Elasticsearch node starts, restarts or loses contact with the master node for any reason. In those cases, the node needs to contact other nodes in the cluster to find any existing master node or initiate the election of a new master node. 

How it works

Upon startup, each node looks for other nodes, firstly by contacting the IP addresses of eligible master nodes held in the previous cluster state.  If they are not available, it will look for nodes based upon the seed host provider mechanisms available.

Seed host providers may be defined in 3 ways: list based, file based or plugin based. All of these methods provide a list of IP addresses or hostnames which the node should contact in order to obtain a list of master eligible nodes. The node will contact all of these addresses in turn, until either an active master is found, or failing that, until sufficient nodes can be found to elect a new master node.

Examples

The simplest form is to define a list of seed host providers in elasticsearch.yml:

discovery.seed_hosts:
   - 192.168.1.10:9300
   - 192.168.1.11 
   - seeds.mydomain.com

An alternative way is to refer to a file using the following setting:

discovery.seed_providers: file

The file MUST be placed in the following filepath: $ES_PATH_CONF/unicast_hosts.txt

10.10.10.5
10.10.10.6:9305
10.10.10.5:10005
# an IPv6 address
[2001:0db8:85a3:0000:0000:8a2e:0370:7334]:9301

Note that the use of a port is optional. If not used, then the default port range of 9300-9400 will be used.

If you use AWS or GCS then you can install and use a plugin to obtain a list of seed hosts from an API.  A plugin also exists for Azure but is deprecated since version 5.

AWS plugin

A typical configuration could be as follows:

discovery.seed_providers: ec2
discovery.ec2.tag.role: master
discovery.ec2.tag.environment: dev
discovery.ec2.endpoint: ec2.us-east-1.amazonaws.com
cloud.node.auto_attributes: true
cluster.routing.allocation.awareness.attributes: aws_availability_zone

The above configuration would look for all nodes with a tag called “environment” set to “dev” and a tag called “role” set to “master”, in the AWS zone us-east-1. The last two lines set up cluster routing allocation awareness based upon aws availability zones. (Not necessary, but nice to have).

GCE plugin

A typical configuration could be as follows:

discovery.seed_providers: gce
cloud.gce.project_id: <your-google-project-id>
cloud.gce.zone: <your-zone>
discovery.gce.tags: <my-tag-name>

The above configuration would look for all virtual machines inside your project, zone and with a tag set to the tag name you provide.

Notes and good things to know

Cluster formation depends on correct setup of the network.host settings in elasticsearch.yml.  Make sure that the nodes can reach each other across the network using their IP addresses / hostname, and are not getting blocked due to firewall settings on the ports required.